STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YUC2-3Flavin-containing monooxygenase. (420 aa)    
Predicted Functional Partners:
TAR2
Tryptophan aminotransferase-related protein 2.
     
 0.911
TAR2-2
Tryptophan aminotransferase-related protein 2.
     
 0.911
MA16_Dca009063
Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase.
     
 0.901
AMI1
Amidase 1.
    
 0.715
GA2OX1
Gibberellin 2-beta-dioxygenase 1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
     
 0.691
ALDH3F1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.673
ALDH3F1-2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.673
ALDH3H1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.673
ALDH
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.673
ALDH3H1-2
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.673
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.