STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMR1-3Threonine dehydratase biosynthetic, chloroplastic. (73 aa)    
Predicted Functional Partners:
MA16_Dca005859
Acetolactate synthase small subunit 2, chloroplastic.
  
 
 0.820
ALS1
Acetolactate synthase.
  
 0.721
MA16_Dca025906
Diphthami_syn_2 domain-containing protein.
  
 0.689
MA16_Dca012353
Dihydroxy-acid dehydratase.
  
  
 0.683
P5CS
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.
  
  
 0.619
HACL
2-hydroxyacyl-CoA lyase.
  
 0.586
HACL-2
2-hydroxyacyl-CoA lyase; Belongs to the TPP enzyme family.
  
 0.586
SCE1
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.544
SCE1-2
SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.544
MA16_Dca025592
Threonine aldolase.
  
 
 0.461
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.