STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GWD3-2Phosphoglucan, water dikinase, chloroplastic. (1185 aa)    
Predicted Functional Partners:
ISA3
Isoamylase 3, chloroplastic.
   
  
 0.572
MAD2
Mitotic spindle checkpoint protein MAD2.
    
   0.550
MA16_Dca004210
Uncharacterized protein.
    
   0.544
ISA2
Isoamylase 2, chloroplastic.
   
  
 0.533
MA16_Dca000314
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
  
 0.503
DPE2
4-alpha-glucanotransferase DPE2.
   
  
 0.502
DPE1
4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic.
   
  
 0.476
DPE1-2
4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic.
   
  
 0.476
AMY3
Alpha-amylase.
   
  
 0.466
DSP4
Phosphoglucan phosphatase DSP4, chloroplastic.
   
  
 0.457
Your Current Organism:
Dendrobium catenatum
NCBI taxonomy Id: 906689
Other names: D. catenatum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.