STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEE17557.1Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR019887; KEGG: cth:Cthe_0362 AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family; IMG reference gene:2504921063; PFAM: AsnC family. (161 aa)    
Predicted Functional Partners:
AEE17558.1
COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: bcl:ABC2913 hypothetical protein; PFAM: Aminotransferase, class I/II; PRIAM: Aspartate transaminase; SPTR: Aspartate aminotransferase; IMG reference gene:2504921064; PFAM: Aminotransferase class I and II.
 
   
 0.947
AEE17556.1
Metallophosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: tde:TDE1698 serine/threonine protein phosphatase family protein; PFAM: Metallophosphoesterase; SPTR: Serine/threonine protein phosphatase family protein; IMG reference gene:2504921062; PFAM: Calcineurin-like phosphoesterase.
  
  
 0.450
AEE17555.1
KEGG: tde:TDE1699 hypothetical protein; SPTR: Putative uncharacterized protein; IMG reference gene:2504921061.
       0.425
Your Current Organism:
Treponema brennaborense
NCBI taxonomy Id: 906968
Other names: T. brennaborense DSM 12168, Treponema brennaborense DSM 12168, Treponema brennaborense str. DSM 12168, Treponema brennaborense strain DSM 12168
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