Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADQ90266.1 | ADQ90267.1 | MHP168_043 | MHP168_044 | Putative uncharacterized protein. | DNA polymerase IV. | 0.479 |
ADQ90266.1 | ADQ90268.1 | MHP168_043 | MHP168_045 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.443 |
ADQ90266.1 | ADQ90891.2 | MHP168_043 | MHP168_710 | Putative uncharacterized protein. | Hypothetical protein. | 0.806 |
ADQ90266.1 | ADQ90892.1 | MHP168_043 | MHP168_711 | Putative uncharacterized protein. | Hypothetical protein. | 0.610 |
ADQ90266.1 | atpB | MHP168_043 | MHP168_046 | Putative uncharacterized protein. | ATP synthase subunit a. | 0.478 |
ADQ90266.1 | atpE | MHP168_043 | MHP168_047 | Putative uncharacterized protein. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.420 |
ADQ90266.1 | obgE | MHP168_043 | MHP168_042 | Putative uncharacterized protein. | GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.607 |
ADQ90267.1 | ADQ90266.1 | MHP168_044 | MHP168_043 | DNA polymerase IV. | Putative uncharacterized protein. | 0.479 |
ADQ90267.1 | ADQ90268.1 | MHP168_044 | MHP168_045 | DNA polymerase IV. | Putative uncharacterized protein. | 0.782 |
ADQ90267.1 | ADQ90891.2 | MHP168_044 | MHP168_710 | DNA polymerase IV. | Hypothetical protein. | 0.479 |
ADQ90267.1 | ADQ90892.1 | MHP168_044 | MHP168_711 | DNA polymerase IV. | Hypothetical protein. | 0.654 |
ADQ90267.1 | atpB | MHP168_044 | MHP168_046 | DNA polymerase IV. | ATP synthase subunit a. | 0.792 |
ADQ90267.1 | atpE | MHP168_044 | MHP168_047 | DNA polymerase IV. | ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.694 |
ADQ90267.1 | atpF | MHP168_044 | MHP168_048 | DNA polymerase IV. | ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. | 0.527 |
ADQ90267.1 | atpH | MHP168_044 | MHP168_049 | DNA polymerase IV. | ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.520 |
ADQ90267.1 | obgE | MHP168_044 | MHP168_042 | DNA polymerase IV. | GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.489 |
ADQ90268.1 | ADQ90266.1 | MHP168_045 | MHP168_043 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.443 |
ADQ90268.1 | ADQ90267.1 | MHP168_045 | MHP168_044 | Putative uncharacterized protein. | DNA polymerase IV. | 0.782 |
ADQ90268.1 | ADQ90891.2 | MHP168_045 | MHP168_710 | Putative uncharacterized protein. | Hypothetical protein. | 0.443 |
ADQ90268.1 | ADQ90892.1 | MHP168_045 | MHP168_711 | Putative uncharacterized protein. | Hypothetical protein. | 0.628 |
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