STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC03092.1KEGG: ctp:CTRG_03857 hypothetical protein; SPTR: Putative fimbrial protein. (138 aa)    
Predicted Functional Partners:
EIC03090.1
KEGG: tde:TDE0262 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
EIC03091.1
KEGG: brm:Bmur_2623 hypothetical protein; SPTR: Putative lipoprotein.
       0.773
EIC03088.1
TIGRFAM: addiction module toxin component, YafQ family; addiction module toxin, RelE/StbE family; COGs: COG3041 conserved hypothetical protein; InterPro IPR012753; KEGG: tde:TDE0303 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: addiction module toxin, RelE/StbE family.
       0.519
EIC03089.1
PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family; COGs: COG3077 DNA-damage-inducible protein J; InterPro IPR007337; KEGG: tde:TDE0302 hypothetical protein; PFAM: RelB antitoxin; SPTR: Putative uncharacterized protein; TIGRFAM: addiction module antitoxin, RelB/DinJ family.
       0.519
EIC03093.1
KEGG: cel:Y70G10A.2 hypothetical protein; SPTR: Putative lipoprotein.
       0.451
Your Current Organism:
Treponema saccharophilum
NCBI taxonomy Id: 907348
Other names: T. saccharophilum DSM 2985, Treponema saccharophilum DSM 2985, Treponema saccharophilum str. DSM 2985, Treponema saccharophilum strain DSM 2985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.