STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702325_00118Unannotated protein. (469 aa)    
Predicted Functional Partners:
GCA_000702325_00119
Unannotated protein.
 
 
 0.993
GCA_000702325_01347
Unannotated protein.
  
 
 0.910
GCA_000702325_00117
Unannotated protein.
       0.751
GCA_000702325_01262
Unannotated protein.
   
 
 0.562
GCA_000702325_00124
Unannotated protein.
  
  
 0.512
GCA_000702325_00605
Unannotated protein.
     
 0.489
GCA_000702325_00123
Unannotated protein.
  
  
 0.488
GCA_000702325_00121
Unannotated protein.
     
 0.446
GCA_000702325_01355
Unannotated protein.
      
 0.440
GCA_000702325_00125
Unannotated protein.
       0.434
Your Current Organism:
Thiomicrorhabdus sp. MilosT2
NCBI taxonomy Id: 90814
Other names: T. sp. Milos-T2, Thiomicrorhabdus sp. DSM 13229, Thiomicrorhabdus sp. Milos-T2, Thiomicrospira sp. DSM 13229, Thiomicrospira sp. Milos-T2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.