STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702325_02231Unannotated protein. (395 aa)    
Predicted Functional Partners:
GCA_000702325_02232
Unannotated protein.
 0.999
GCA_000702325_02233
Unannotated protein.
 
 0.999
GCA_000702325_01020
Unannotated protein.
 
   
  0.915
GCA_000702325_01911
Unannotated protein.
 
   
 0.861
GCA_000702325_00615
Unannotated protein.
  
  
 
0.842
GCA_000702325_01021
Unannotated protein.
 
   
  0.837
GCA_000702325_00555
Unannotated protein.
     
 0.824
GCA_000702325_02230
Unannotated protein.
       0.746
GCA_000702325_01194
Unannotated protein.
 
   
  0.743
GCA_000702325_00139
Unannotated protein.
  
  
  0.714
Your Current Organism:
Thiomicrorhabdus sp. MilosT2
NCBI taxonomy Id: 90814
Other names: T. sp. Milos-T2, Thiomicrorhabdus sp. DSM 13229, Thiomicrorhabdus sp. Milos-T2, Thiomicrospira sp. DSM 13229, Thiomicrospira sp. Milos-T2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.