STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMS44113.1Protein-tyrosine phosphatase, low molecular weight. (175 aa)    
Predicted Functional Partners:
ArsB
Arsenic resistance protein.
 
  
 0.941
EMS44114.1
ArsR family transcriptional regulator.
  
 0.917
ArsC
Arsenate reductase.
 
  
 0.881
EMS44110.1
Major facilitator transporter.
     
 0.793
trx
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.769
TrxA
Thioredoxin.
  
 
 0.769
ArsH
Arsenical resistance protein ArsH.
 
  
 0.736
EMS39177.1
Arsenical pump membrane protein.
  
 
 0.708
ybeY
Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.642
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
   0.636
Your Current Organism:
Methylobacterium mesophilicum
NCBI taxonomy Id: 908290
Other names: M. mesophilicum SR1.6/6, Methylobacterium mesophilicum SR1.6/6, Methylobacterium mesophilicum str. SR1.6/6, Methylobacterium mesophilicum strain SR1.6/6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.