STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMS39127.1Hypothetical protein; Belongs to the UPF0312 family. (206 aa)    
Predicted Functional Partners:
EMS39128.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.613
EMS40909.1
Cytochrome B561.
 
  
 0.526
EMS44139.1
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.479
gpmA
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.479
EMS43817.1
Cytochrome B561.
 
  
 0.449
Your Current Organism:
Methylobacterium mesophilicum
NCBI taxonomy Id: 908290
Other names: M. mesophilicum SR1.6/6, Methylobacterium mesophilicum SR1.6/6, Methylobacterium mesophilicum str. SR1.6/6, Methylobacterium mesophilicum strain SR1.6/6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.