Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EFR31666.1 | EFR31674.1 | HMPREF9257_0211 | HMPREF9257_0213 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | 0.923 |
| EFR31666.1 | EFR31710.1 | HMPREF9257_0211 | HMPREF9257_0214 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | 0.917 |
| EFR31666.1 | EFR31738.1 | HMPREF9257_0211 | HMPREF9257_0212 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.976 |
| EFR31666.1 | EFR31801.1 | HMPREF9257_0211 | HMPREF9257_0210 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| EFR31666.1 | pyrP | HMPREF9257_0211 | HMPREF9257_0209 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Putative permease; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.566 |
| EFR31674.1 | EFR31666.1 | HMPREF9257_0213 | HMPREF9257_0211 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.923 |
| EFR31674.1 | EFR31710.1 | HMPREF9257_0213 | HMPREF9257_0214 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | 0.751 |
| EFR31674.1 | EFR31738.1 | HMPREF9257_0213 | HMPREF9257_0212 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.983 |
| EFR31674.1 | EFR31801.1 | HMPREF9257_0213 | HMPREF9257_0210 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | Hypothetical protein; Identified by glimmer; putative. | 0.635 |
| EFR31674.1 | pyrP | HMPREF9257_0213 | HMPREF9257_0209 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | Putative permease; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.473 |
| EFR31710.1 | EFR31666.1 | HMPREF9257_0214 | HMPREF9257_0211 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.917 |
| EFR31710.1 | EFR31674.1 | HMPREF9257_0214 | HMPREF9257_0213 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | 0.751 |
| EFR31710.1 | EFR31738.1 | HMPREF9257_0214 | HMPREF9257_0212 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.991 |
| EFR31710.1 | EFR31801.1 | HMPREF9257_0214 | HMPREF9257_0210 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | Hypothetical protein; Identified by glimmer; putative. | 0.606 |
| EFR31710.1 | pyrP | HMPREF9257_0214 | HMPREF9257_0209 | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | Putative permease; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.453 |
| EFR31738.1 | EFR31666.1 | HMPREF9257_0212 | HMPREF9257_0211 | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | 0.976 |
| EFR31738.1 | EFR31674.1 | HMPREF9257_0212 | HMPREF9257_0213 | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | 0.983 |
| EFR31738.1 | EFR31710.1 | HMPREF9257_0212 | HMPREF9257_0214 | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | ABC transporter substrate binding protein; Identified by match to protein family HMM PF04392. | 0.991 |
| EFR31738.1 | EFR31801.1 | HMPREF9257_0212 | HMPREF9257_0210 | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Hypothetical protein; Identified by glimmer; putative. | 0.757 |
| EFR31738.1 | pyrP | HMPREF9257_0212 | HMPREF9257_0209 | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | Putative permease; Identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801. | 0.555 |
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