STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR31433.1Von Willebrand factor type A domain protein; Identified by match to protein family HMM PF00092. (549 aa)    
Predicted Functional Partners:
EFR31436.1
Hypothetical protein.
 
     0.951
EFR31465.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.950
EFR31203.1
Methyltransferase domain protein; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242.
   
 0.833
EFR31453.1
Toxic anion resistance protein TelA; Identified by match to protein family HMM PF05816; Belongs to the TelA family.
 
     0.686
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
  0.633
EFR30554.1
FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266.
   
 
  0.608
noxE
NADH oxidase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992.
     
 0.605
EFR31734.1
Putative chlorophyll synthesis pathway protein BchC; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
   
 
 0.567
EFR31733.1
Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
   
 
 0.567
EFR30773.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00497; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
  
  0.561
Your Current Organism:
Eremococcus coleocola
NCBI taxonomy Id: 908337
Other names: E. coleocola ACS-139-V-Col8, Eremococcus coleocola ACS-139-V-Col8, Eremococcus coleocola str. ACS-139-V-Col8, Eremococcus coleocola strain ACS-139-V-Col8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.