STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR32121.1Lipid kinase, YegS/Rv2252/BmrU family; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147. (311 aa)    
Predicted Functional Partners:
EFR31367.1
Lipid kinase, YegS/Rv2252/BmrU family; Identified by match to protein family HMM PF00781.
  
 
  0.904
cdsA
Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148.
    
 0.845
EFR32026.1
Acyltransferase; Identified by match to protein family HMM PF01553.
    
 0.841
EFR31076.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
   
 
  0.838
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
  0.782
EFR30951.1
Glycosyltransferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
 
  0.764
EFR31967.1
Identified by match to protein family HMM PF01569.
   
 0.538
EFR31652.1
Hydrolase, alpha/beta domain protein; Identified by match to protein family HMM PF07859.
 
 
  0.529
dgkA
Prokaryotic diacylglycerol kinase; Identified by match to protein family HMM PF01219.
     
 0.520
EFR31904.1
Putative esterase; Identified by match to protein family HMM PF00756.
  
  
  0.501
Your Current Organism:
Eremococcus coleocola
NCBI taxonomy Id: 908337
Other names: E. coleocola ACS-139-V-Col8, Eremococcus coleocola ACS-139-V-Col8, Eremococcus coleocola str. ACS-139-V-Col8, Eremococcus coleocola strain ACS-139-V-Col8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.