STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR31154.1Identified by match to protein family HMM PF00149. (449 aa)    
Predicted Functional Partners:
EFR32076.1
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01520; match to protein family HMM PF08239.
    
  0.756
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.682
EFR31109.1
GMP synthase domain protein; Identified by match to protein family HMM PF00958.
    
  0.682
EFR30679.1
LysM domain protein; Identified by match to protein family HMM PF01476.
    
  0.664
EFR30913.1
Heptaprenyl diphosphate synthase component I; Identified by match to protein family HMM PF07456.
  
     0.634
EFR30512.1
5'-nucleotidase, C-terminal domain protein; Identified by match to protein family HMM PF00149; match to protein family HMM PF02872; Belongs to the 5'-nucleotidase family.
 
 
 0.631
EFR30924.1
Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
  
     0.587
EFR31094.1
Hypothetical protein; Identified by glimmer; putative.
       0.578
EFR31502.1
Identified by match to protein family HMM PF00149; Belongs to the 5'-nucleotidase family.
  
 
 0.559
EFR31211.1
Identified by match to protein family HMM PF06993.
       0.528
Your Current Organism:
Eremococcus coleocola
NCBI taxonomy Id: 908337
Other names: E. coleocola ACS-139-V-Col8, Eremococcus coleocola ACS-139-V-Col8, Eremococcus coleocola str. ACS-139-V-Col8, Eremococcus coleocola strain ACS-139-V-Col8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.