STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR31011.1LysM domain protein; Identified by match to protein family HMM PF01476. (404 aa)    
Predicted Functional Partners:
EFR30934.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.738
EFR31692.1
Cpl-7 lysozyme C-terminal domain protein; Identified by match to protein family HMM PF08230.
  
    0.683
EFR31414.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.678
EFR31767.1
Identified by match to protein family HMM PF00877.
  
  
 0.671
EFR31880.1
Hypothetical protein.
  
    0.637
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.630
EFR31389.1
LPXTG-motif cell wall anchor domain protein; Identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167.
  
   
 0.627
EFR31115.1
O-antigen polymerase; Identified by match to protein family HMM PF04932.
 
     0.621
EFR30567.1
YycH protein; Identified by match to protein family HMM PF07435.
  
     0.572
EFR31147.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
       0.548
Your Current Organism:
Eremococcus coleocola
NCBI taxonomy Id: 908337
Other names: E. coleocola ACS-139-V-Col8, Eremococcus coleocola ACS-139-V-Col8, Eremococcus coleocola str. ACS-139-V-Col8, Eremococcus coleocola strain ACS-139-V-Col8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.