STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR31915.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
EFR31914.1
Putative exopolyphosphatase; Identified by match to protein family HMM PF02541.
       0.779
ppk1
Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.720
EFR30984.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.705
EFR32027.1
Hypothetical protein.
  
     0.699
cvpA
Identified by match to protein family HMM PF02674.
  
     0.641
EFR32067.1
Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912.
  
     0.576
EFR30656.1
Hypothetical protein.
 
     0.569
EFR31919.1
Hypothetical protein; Identified by glimmer; putative.
       0.566
EFR30980.1
Hypothetical protein.
  
     0.548
EFR31659.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.543
Your Current Organism:
Eremococcus coleocola
NCBI taxonomy Id: 908337
Other names: E. coleocola ACS-139-V-Col8, Eremococcus coleocola ACS-139-V-Col8, Eremococcus coleocola str. ACS-139-V-Col8, Eremococcus coleocola strain ACS-139-V-Col8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.