Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRQ88138.1 | KRQ88140.1 | ABG79_00308 | ABG79_00310 | Hypothetical protein. | Hypothetical protein; Belongs to the UPF0758 family. | 0.870 |
KRQ88138.1 | KRQ88143.1 | ABG79_00308 | ABG79_00313 | Hypothetical protein. | Rod shape-determining protein MreD. | 0.813 |
KRQ88138.1 | maf | ABG79_00308 | ABG79_00309 | Hypothetical protein. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.870 |
KRQ88138.1 | minC | ABG79_00308 | ABG79_00315 | Hypothetical protein. | Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.573 |
KRQ88138.1 | minD | ABG79_00308 | ABG79_00316 | Hypothetical protein. | Septum site-determining protein MinD. | 0.564 |
KRQ88138.1 | minE | ABG79_00308 | ABG79_00317 | Hypothetical protein. | Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.546 |
KRQ88138.1 | mreB_1 | ABG79_00308 | ABG79_00311 | Hypothetical protein. | Rod shape-determining protein MreB. | 0.766 |
KRQ88138.1 | mreC | ABG79_00308 | ABG79_00312 | Hypothetical protein. | Cell shape-determining protein MreC precursor; Involved in formation and maintenance of cell shape. | 0.831 |
KRQ88138.1 | spoVD_1 | ABG79_00308 | ABG79_00314 | Hypothetical protein. | Stage V sporulation protein D. | 0.798 |
KRQ88140.1 | KRQ88138.1 | ABG79_00310 | ABG79_00308 | Hypothetical protein; Belongs to the UPF0758 family. | Hypothetical protein. | 0.870 |
KRQ88140.1 | KRQ88143.1 | ABG79_00310 | ABG79_00313 | Hypothetical protein; Belongs to the UPF0758 family. | Rod shape-determining protein MreD. | 0.862 |
KRQ88140.1 | maf | ABG79_00310 | ABG79_00309 | Hypothetical protein; Belongs to the UPF0758 family. | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.974 |
KRQ88140.1 | minC | ABG79_00310 | ABG79_00315 | Hypothetical protein; Belongs to the UPF0758 family. | Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family. | 0.701 |
KRQ88140.1 | minD | ABG79_00310 | ABG79_00316 | Hypothetical protein; Belongs to the UPF0758 family. | Septum site-determining protein MinD. | 0.636 |
KRQ88140.1 | minE | ABG79_00310 | ABG79_00317 | Hypothetical protein; Belongs to the UPF0758 family. | Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.626 |
KRQ88140.1 | mrdB | ABG79_00310 | ABG79_00318 | Hypothetical protein; Belongs to the UPF0758 family. | Rod shape-determining protein RodA; Belongs to the SEDS family. | 0.501 |
KRQ88140.1 | mreB_1 | ABG79_00310 | ABG79_00311 | Hypothetical protein; Belongs to the UPF0758 family. | Rod shape-determining protein MreB. | 0.863 |
KRQ88140.1 | mreC | ABG79_00310 | ABG79_00312 | Hypothetical protein; Belongs to the UPF0758 family. | Cell shape-determining protein MreC precursor; Involved in formation and maintenance of cell shape. | 0.973 |
KRQ88140.1 | spoVD_1 | ABG79_00310 | ABG79_00314 | Hypothetical protein; Belongs to the UPF0758 family. | Stage V sporulation protein D. | 0.800 |
KRQ88143.1 | KRQ88138.1 | ABG79_00313 | ABG79_00308 | Rod shape-determining protein MreD. | Hypothetical protein. | 0.813 |
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