STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRQ87548.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
pucA
Putative xanthine dehydrogenase subunit A.
 
 
 0.988
pucB
Purine catabolism protein PucB.
  
  0.979
moeA_2
Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
  0.894
ndhS
Nicotinate dehydrogenase small FeS subunit.
 
 
 0.823
ndhF
Nicotinate dehydrogenase FAD-subunit.
 
 
 0.820
ndhL
Nicotinate dehydrogenase large molybdopterin subunit.
 
  
 0.802
ndhM
Nicotinate dehydrogenase medium molybdopterin subunit.
 
  
 0.794
KRQ87549.1
Bacterial transcriptional activator domain protein.
       0.790
nfrA
NADPH-dependent oxidoreductase; Belongs to the flavin oxidoreductase frp family.
 
     0.651
KRQ85960.1
SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
   
 0.586
Your Current Organism:
Caloramator mitchellensis
NCBI taxonomy Id: 908809
Other names: C. mitchellensis, Caloramator mitchellensis Ogg and Patel 2011, Caloramator sp. VF08, JCM 15828, KCTC 5735, strain VF08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.