Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRQ86314.1 | KRQ86748.1 | ABG79_01826 | ABG79_01500 | Hypothetical protein. | Anaerobic benzoate catabolism transcriptional regulator. | 0.622 |
KRQ86314.1 | KRQ87115.1 | ABG79_01826 | ABG79_00913 | Hypothetical protein. | Hypothetical protein. | 0.469 |
KRQ86314.1 | KRQ87953.1 | ABG79_01826 | ABG79_00118 | Hypothetical protein. | Divergent AAA domain protein. | 0.526 |
KRQ86314.1 | cotI_2 | ABG79_01826 | ABG79_00595 | Hypothetical protein. | Spore coat protein I. | 0.736 |
KRQ86314.1 | cotI_3 | ABG79_01826 | ABG79_00597 | Hypothetical protein. | Spore coat protein I. | 0.583 |
KRQ86314.1 | cotS_1 | ABG79_01826 | ABG79_00594 | Hypothetical protein. | Spore coat protein S. | 0.547 |
KRQ86748.1 | KRQ86314.1 | ABG79_01500 | ABG79_01826 | Anaerobic benzoate catabolism transcriptional regulator. | Hypothetical protein. | 0.622 |
KRQ86748.1 | KRQ87953.1 | ABG79_01500 | ABG79_00118 | Anaerobic benzoate catabolism transcriptional regulator. | Divergent AAA domain protein. | 0.519 |
KRQ86748.1 | cotI_2 | ABG79_01500 | ABG79_00595 | Anaerobic benzoate catabolism transcriptional regulator. | Spore coat protein I. | 0.722 |
KRQ86748.1 | cotI_3 | ABG79_01500 | ABG79_00597 | Anaerobic benzoate catabolism transcriptional regulator. | Spore coat protein I. | 0.647 |
KRQ86748.1 | cotS_1 | ABG79_01500 | ABG79_00594 | Anaerobic benzoate catabolism transcriptional regulator. | Spore coat protein S. | 0.587 |
KRQ86838.1 | cotI_2 | ABG79_01329 | ABG79_00595 | Stage III sporulation protein AF (Spore_III_AF). | Spore coat protein I. | 0.401 |
KRQ86838.1 | cotI_3 | ABG79_01329 | ABG79_00597 | Stage III sporulation protein AF (Spore_III_AF). | Spore coat protein I. | 0.578 |
KRQ86838.1 | cotS_1 | ABG79_01329 | ABG79_00594 | Stage III sporulation protein AF (Spore_III_AF). | Spore coat protein S. | 0.538 |
KRQ87115.1 | KRQ86314.1 | ABG79_00913 | ABG79_01826 | Hypothetical protein. | Hypothetical protein. | 0.469 |
KRQ87115.1 | KRQ87953.1 | ABG79_00913 | ABG79_00118 | Hypothetical protein. | Divergent AAA domain protein. | 0.516 |
KRQ87115.1 | cotI_3 | ABG79_00913 | ABG79_00597 | Hypothetical protein. | Spore coat protein I. | 0.473 |
KRQ87115.1 | cotS_1 | ABG79_00913 | ABG79_00594 | Hypothetical protein. | Spore coat protein S. | 0.517 |
KRQ87791.1 | cotI_2 | ABG79_00596 | ABG79_00595 | Hypothetical protein. | Spore coat protein I. | 0.765 |
KRQ87791.1 | cotI_3 | ABG79_00596 | ABG79_00597 | Hypothetical protein. | Spore coat protein I. | 0.781 |
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