STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRQ87813.1Cysteine-rich secretory protein family protein. (188 aa)    
Predicted Functional Partners:
KRQ87449.1
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
    
   0.832
tmoS
Sensor histidine kinase TmoS.
 
    0.596
icaA
Poly-beta-1,6-N-acetyl-D-glucosamine synthase.
       0.548
KRQ87815.1
HEAT repeat protein.
       0.548
phoP_1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
       0.544
ppaX_2
Pyrophosphatase PpaX.
     
 0.455
KRQ87413.1
Hypothetical protein.
    
 0.430
aprX
Serine protease AprX.
     
 0.422
KRQ86061.1
Hypothetical protein.
  
    0.422
rfbM
Mannose-1-phosphate guanylyltransferase RfbM.
       0.402
Your Current Organism:
Caloramator mitchellensis
NCBI taxonomy Id: 908809
Other names: C. mitchellensis, Caloramator mitchellensis Ogg and Patel 2011, Caloramator sp. VF08, JCM 15828, KCTC 5735, strain VF08
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