STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRQ87823.1Oxidative stress defense protein. (244 aa)    
Predicted Functional Partners:
KRQ87824.1
O-Antigen ligase.
       0.757
fliG
Flagellar motor switch protein FliG.
   
   0.661
KRQ87048.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
   0.650
motB
Motility protein B.
    
   0.639
lysN_1
2-aminoadipate transaminase.
  
     0.580
fliN
Flagellar motor switch protein FliN.
 
 
   0.555
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.511
KRQ87822.1
Putative CtpA-like serine protease; Belongs to the peptidase S41A family.
       0.511
flhB_2
Flagellar biosynthetic protein FlhB; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
       0.493
hndD_2
NADP-reducing hydrogenase subunit HndC.
       0.474
Your Current Organism:
Caloramator mitchellensis
NCBI taxonomy Id: 908809
Other names: C. mitchellensis, Caloramator mitchellensis Ogg and Patel 2011, Caloramator sp. VF08, JCM 15828, KCTC 5735, strain VF08
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