Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRQ87048.1 | KRQ87823.1 | ABG79_01241 | ABG79_00628 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Oxidative stress defense protein. | 0.650 |
KRQ87048.1 | flhB_2 | ABG79_01241 | ABG79_01237 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Flagellar biosynthetic protein FlhB; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.999 |
KRQ87048.1 | fliG | ABG79_01241 | ABG79_01252 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Flagellar motor switch protein FliG. | 0.976 |
KRQ87048.1 | fliN | ABG79_01241 | ABG79_02220 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Flagellar motor switch protein FliN. | 0.990 |
KRQ87048.1 | motB | ABG79_01241 | ABG79_01242 | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Motility protein B. | 0.978 |
KRQ87822.1 | KRQ87823.1 | ABG79_00627 | ABG79_00628 | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | Oxidative stress defense protein. | 0.511 |
KRQ87822.1 | KRQ87824.1 | ABG79_00627 | ABG79_00629 | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | O-Antigen ligase. | 0.501 |
KRQ87822.1 | uppP | ABG79_00627 | ABG79_00626 | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.816 |
KRQ87823.1 | KRQ87048.1 | ABG79_00628 | ABG79_01241 | Oxidative stress defense protein. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.650 |
KRQ87823.1 | KRQ87822.1 | ABG79_00628 | ABG79_00627 | Oxidative stress defense protein. | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | 0.511 |
KRQ87823.1 | KRQ87824.1 | ABG79_00628 | ABG79_00629 | Oxidative stress defense protein. | O-Antigen ligase. | 0.757 |
KRQ87823.1 | flhB_2 | ABG79_00628 | ABG79_01237 | Oxidative stress defense protein. | Flagellar biosynthetic protein FlhB; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.493 |
KRQ87823.1 | fliG | ABG79_00628 | ABG79_01252 | Oxidative stress defense protein. | Flagellar motor switch protein FliG. | 0.661 |
KRQ87823.1 | fliN | ABG79_00628 | ABG79_02220 | Oxidative stress defense protein. | Flagellar motor switch protein FliN. | 0.555 |
KRQ87823.1 | hndD_2 | ABG79_00628 | ABG79_00630 | Oxidative stress defense protein. | NADP-reducing hydrogenase subunit HndC. | 0.474 |
KRQ87823.1 | lysN_1 | ABG79_00628 | ABG79_00225 | Oxidative stress defense protein. | 2-aminoadipate transaminase. | 0.580 |
KRQ87823.1 | motB | ABG79_00628 | ABG79_01242 | Oxidative stress defense protein. | Motility protein B. | 0.639 |
KRQ87823.1 | uppP | ABG79_00628 | ABG79_00626 | Oxidative stress defense protein. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.511 |
KRQ87824.1 | KRQ87822.1 | ABG79_00629 | ABG79_00627 | O-Antigen ligase. | Putative CtpA-like serine protease; Belongs to the peptidase S41A family. | 0.501 |
KRQ87824.1 | KRQ87823.1 | ABG79_00629 | ABG79_00628 | O-Antigen ligase. | Oxidative stress defense protein. | 0.757 |
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