Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRQ85959.1 | KRQ85968.1 | ABG79_02263 | ABG79_02272 | Colicin V production protein. | MazG-like family protein. | 0.726 |
KRQ85959.1 | KRQ86314.1 | ABG79_02263 | ABG79_01826 | Colicin V production protein. | Hypothetical protein. | 0.722 |
KRQ85959.1 | pheT | ABG79_02263 | ABG79_00684 | Colicin V production protein. | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.502 |
KRQ85959.1 | zapA | ABG79_02263 | ABG79_00685 | Colicin V production protein. | Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.775 |
KRQ85968.1 | KRQ85959.1 | ABG79_02272 | ABG79_02263 | MazG-like family protein. | Colicin V production protein. | 0.726 |
KRQ85968.1 | KRQ86314.1 | ABG79_02272 | ABG79_01826 | MazG-like family protein. | Hypothetical protein. | 0.699 |
KRQ85968.1 | zapA | ABG79_02272 | ABG79_00685 | MazG-like family protein. | Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.634 |
KRQ86314.1 | KRQ85959.1 | ABG79_01826 | ABG79_02263 | Hypothetical protein. | Colicin V production protein. | 0.722 |
KRQ86314.1 | KRQ85968.1 | ABG79_01826 | ABG79_02272 | Hypothetical protein. | MazG-like family protein. | 0.699 |
KRQ86314.1 | zapA | ABG79_01826 | ABG79_00685 | Hypothetical protein. | Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.653 |
KRQ87350.1 | mutS2 | ABG79_00688 | ABG79_00687 | Hypothetical protein. | Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.658 |
KRQ87350.1 | pheS | ABG79_00688 | ABG79_00683 | Hypothetical protein. | Phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.448 |
KRQ87350.1 | pheT | ABG79_00688 | ABG79_00684 | Hypothetical protein. | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.596 |
KRQ87350.1 | yhbU_1 | ABG79_00688 | ABG79_00686 | Hypothetical protein. | Putative protease YhbU precursor. | 0.652 |
KRQ87350.1 | zapA | ABG79_00688 | ABG79_00685 | Hypothetical protein. | Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.693 |
ftsZ | pheT | ABG79_01562 | ABG79_00684 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.681 |
ftsZ | zapA | ABG79_01562 | ABG79_00685 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.823 |
mutS2 | KRQ87350.1 | ABG79_00687 | ABG79_00688 | Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | Hypothetical protein. | 0.658 |
mutS2 | pheS | ABG79_00687 | ABG79_00683 | Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | Phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.636 |
mutS2 | pheT | ABG79_00687 | ABG79_00684 | Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.677 |
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