Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRQ87079.1 | KRQ87080.1 | ABG79_00877 | ABG79_00878 | Hypothetical protein; Transcriptional repressor SmtB homolog. | Hypothetical protein. | 0.515 |
KRQ87079.1 | birA | ABG79_00877 | ABG79_00040 | Hypothetical protein; Transcriptional repressor SmtB homolog. | Bifunctional ligase/repressor BirA. | 0.421 |
KRQ87079.1 | cadA_1 | ABG79_00877 | ABG79_00501 | Hypothetical protein; Transcriptional repressor SmtB homolog. | Cadmium, zinc and cobalt-transporting ATPase. | 0.822 |
KRQ87079.1 | cadA_2 | ABG79_00877 | ABG79_00876 | Hypothetical protein; Transcriptional repressor SmtB homolog. | Cadmium, zinc and cobalt-transporting ATPase. | 0.963 |
KRQ87079.1 | cdr_1 | ABG79_00877 | ABG79_00128 | Hypothetical protein; Transcriptional repressor SmtB homolog. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.578 |
KRQ87079.1 | copA_2 | ABG79_00877 | ABG79_01835 | Hypothetical protein; Transcriptional repressor SmtB homolog. | Copper-exporting P-type ATPase A. | 0.405 |
KRQ87080.1 | KRQ87079.1 | ABG79_00878 | ABG79_00877 | Hypothetical protein. | Hypothetical protein; Transcriptional repressor SmtB homolog. | 0.515 |
KRQ87080.1 | cadA_2 | ABG79_00878 | ABG79_00876 | Hypothetical protein. | Cadmium, zinc and cobalt-transporting ATPase. | 0.618 |
birA | KRQ87079.1 | ABG79_00040 | ABG79_00877 | Bifunctional ligase/repressor BirA. | Hypothetical protein; Transcriptional repressor SmtB homolog. | 0.421 |
birA | copA_2 | ABG79_00040 | ABG79_01835 | Bifunctional ligase/repressor BirA. | Copper-exporting P-type ATPase A. | 0.403 |
cadA_1 | KRQ87079.1 | ABG79_00501 | ABG79_00877 | Cadmium, zinc and cobalt-transporting ATPase. | Hypothetical protein; Transcriptional repressor SmtB homolog. | 0.822 |
cadA_1 | cdr_1 | ABG79_00501 | ABG79_00128 | Cadmium, zinc and cobalt-transporting ATPase. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.566 |
cadA_1 | copA_2 | ABG79_00501 | ABG79_01835 | Cadmium, zinc and cobalt-transporting ATPase. | Copper-exporting P-type ATPase A. | 0.809 |
cadA_2 | KRQ87079.1 | ABG79_00876 | ABG79_00877 | Cadmium, zinc and cobalt-transporting ATPase. | Hypothetical protein; Transcriptional repressor SmtB homolog. | 0.963 |
cadA_2 | KRQ87080.1 | ABG79_00876 | ABG79_00878 | Cadmium, zinc and cobalt-transporting ATPase. | Hypothetical protein. | 0.618 |
cadA_2 | cdr_1 | ABG79_00876 | ABG79_00128 | Cadmium, zinc and cobalt-transporting ATPase. | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | 0.566 |
cadA_2 | copA_2 | ABG79_00876 | ABG79_01835 | Cadmium, zinc and cobalt-transporting ATPase. | Copper-exporting P-type ATPase A. | 0.812 |
cdr_1 | KRQ87079.1 | ABG79_00128 | ABG79_00877 | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Hypothetical protein; Transcriptional repressor SmtB homolog. | 0.578 |
cdr_1 | cadA_1 | ABG79_00128 | ABG79_00501 | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Cadmium, zinc and cobalt-transporting ATPase. | 0.566 |
cdr_1 | cadA_2 | ABG79_00128 | ABG79_00876 | Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family. | Cadmium, zinc and cobalt-transporting ATPase. | 0.566 |
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