Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRQ87124.1 | KRQ87125.1 | ABG79_00922 | ABG79_00923 | Hypothetical protein. | Hypothetical protein. | 0.780 |
KRQ87124.1 | dxs_1 | ABG79_00922 | ABG79_00924 | Hypothetical protein. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.716 |
KRQ87124.1 | ftsE | ABG79_00922 | ABG79_00921 | Hypothetical protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.694 |
KRQ87124.1 | ftsX | ABG79_00922 | ABG79_00920 | Hypothetical protein. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.694 |
KRQ87124.1 | mepM_1 | ABG79_00922 | ABG79_00919 | Hypothetical protein. | Murein DD-endopeptidase MepM. | 0.469 |
KRQ87124.1 | tktA | ABG79_00922 | ABG79_00925 | Hypothetical protein. | Transketolase 1. | 0.716 |
KRQ87125.1 | KRQ87124.1 | ABG79_00923 | ABG79_00922 | Hypothetical protein. | Hypothetical protein. | 0.780 |
KRQ87125.1 | dxs_1 | ABG79_00923 | ABG79_00924 | Hypothetical protein. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.491 |
KRQ87125.1 | ftsE | ABG79_00923 | ABG79_00921 | Hypothetical protein. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.452 |
KRQ87125.1 | ftsX | ABG79_00923 | ABG79_00920 | Hypothetical protein. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.452 |
KRQ87125.1 | mepM_1 | ABG79_00923 | ABG79_00919 | Hypothetical protein. | Murein DD-endopeptidase MepM. | 0.425 |
KRQ87125.1 | tktA | ABG79_00923 | ABG79_00925 | Hypothetical protein. | Transketolase 1. | 0.491 |
dxs_1 | KRQ87124.1 | ABG79_00924 | ABG79_00922 | 1-deoxy-D-xylulose-5-phosphate synthase. | Hypothetical protein. | 0.716 |
dxs_1 | KRQ87125.1 | ABG79_00924 | ABG79_00923 | 1-deoxy-D-xylulose-5-phosphate synthase. | Hypothetical protein. | 0.491 |
dxs_1 | ftsE | ABG79_00924 | ABG79_00921 | 1-deoxy-D-xylulose-5-phosphate synthase. | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 0.668 |
dxs_1 | ftsX | ABG79_00924 | ABG79_00920 | 1-deoxy-D-xylulose-5-phosphate synthase. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.616 |
dxs_1 | tktA | ABG79_00924 | ABG79_00925 | 1-deoxy-D-xylulose-5-phosphate synthase. | Transketolase 1. | 0.999 |
ftsE | KRQ87124.1 | ABG79_00921 | ABG79_00922 | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | Hypothetical protein. | 0.694 |
ftsE | KRQ87125.1 | ABG79_00921 | ABG79_00923 | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | Hypothetical protein. | 0.452 |
ftsE | dxs_1 | ABG79_00921 | ABG79_00924 | Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.668 |
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