STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
korB2-oxoglutarate oxidoreductase subunit KorB. (250 aa)    
Predicted Functional Partners:
nifJ
Pyruvate-flavodoxin oxidoreductase.
  
 0.999
porC_1
Pyruvate synthase subunit PorC.
 0.999
korA
2-oxoglutarate oxidoreductase subunit KorA.
 
 0.999
porA
Pyruvate synthase subunit PorA.
  
 0.991
ndhI
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic.
 
  
 0.983
porD
Pyruvate synthase subunit PorD.
  
 0.982
porC_2
Pyruvate synthase subunit PorC.
  
 0.981
adhE_3
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.909
KRQ87405.1
Indolepyruvate oxidoreductase subunit beta.
 
 0.905
KRQ87172.1
Hypothetical protein.
 
     0.904
Your Current Organism:
Caloramator mitchellensis
NCBI taxonomy Id: 908809
Other names: C. mitchellensis, Caloramator mitchellensis Ogg and Patel 2011, Caloramator sp. VF08, JCM 15828, KCTC 5735, strain VF08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.