STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRQ87064.1Hypothetical protein. (154 aa)    
Predicted Functional Partners:
fliS
Flagellar protein FliS.
       0.782
KRQ87066.1
Hypothetical protein.
       0.782
KRQ87067.1
Flagellar protein FlaG.
       0.770
rppH
RNA pyrophosphohydrolase.
       0.507
fliE
Flagellar hook-basal body complex protein FliE.
       0.436
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
       0.436
flgB
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
       0.436
yscN
Putative ATP synthase YscN.
       0.402
yscL
Yop proteins translocation protein L.
       0.402
fliG
Flagellar motor switch protein FliG.
       0.402
Your Current Organism:
Caloramator mitchellensis
NCBI taxonomy Id: 908809
Other names: C. mitchellensis, Caloramator mitchellensis Ogg and Patel 2011, Caloramator sp. VF08, JCM 15828, KCTC 5735, strain VF08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.