Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRQ86791.1 | KRQ86792.1 | ABG79_01282 | ABG79_01283 | DNA polymerase III subunit delta. | ComEC family competence protein. | 0.938 |
KRQ86791.1 | KRQ86793.1 | ABG79_01282 | ABG79_01284 | DNA polymerase III subunit delta. | Hypothetical protein. | 0.805 |
KRQ86791.1 | comEA | ABG79_01282 | ABG79_02236 | DNA polymerase III subunit delta. | ComE operon protein 1. | 0.490 |
KRQ86792.1 | KRQ86791.1 | ABG79_01283 | ABG79_01282 | ComEC family competence protein. | DNA polymerase III subunit delta. | 0.938 |
KRQ86792.1 | KRQ86793.1 | ABG79_01283 | ABG79_01284 | ComEC family competence protein. | Hypothetical protein. | 0.818 |
KRQ86792.1 | KRQ86969.1 | ABG79_01283 | ABG79_01159 | ComEC family competence protein. | Hypothetical protein. | 0.880 |
KRQ86792.1 | KRQ87716.1 | ABG79_01283 | ABG79_00518 | ComEC family competence protein. | DNA utilization protein GntX. | 0.913 |
KRQ86792.1 | comC | ABG79_01283 | ABG79_01345 | ComEC family competence protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.857 |
KRQ86792.1 | comEA | ABG79_01283 | ABG79_02236 | ComEC family competence protein. | ComE operon protein 1. | 0.885 |
KRQ86792.1 | epsF_1 | ABG79_01283 | ABG79_00245 | ComEC family competence protein. | Type II secretion system protein F. | 0.785 |
KRQ86792.1 | epsF_2 | ABG79_01283 | ABG79_01346 | ComEC family competence protein. | Type II secretion system protein F. | 0.785 |
KRQ86792.1 | pheT | ABG79_01283 | ABG79_00684 | ComEC family competence protein. | Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.772 |
KRQ86792.1 | phoP_1 | ABG79_01283 | ABG79_00621 | ComEC family competence protein. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.849 |
KRQ86793.1 | KRQ86791.1 | ABG79_01284 | ABG79_01282 | Hypothetical protein. | DNA polymerase III subunit delta. | 0.805 |
KRQ86793.1 | KRQ86792.1 | ABG79_01284 | ABG79_01283 | Hypothetical protein. | ComEC family competence protein. | 0.818 |
KRQ86969.1 | KRQ86792.1 | ABG79_01159 | ABG79_01283 | Hypothetical protein. | ComEC family competence protein. | 0.880 |
KRQ86969.1 | KRQ87716.1 | ABG79_01159 | ABG79_00518 | Hypothetical protein. | DNA utilization protein GntX. | 0.886 |
KRQ86969.1 | comC | ABG79_01159 | ABG79_01345 | Hypothetical protein. | Type 4 prepilin-like proteins leader peptide-processing enzyme. | 0.805 |
KRQ86969.1 | comEA | ABG79_01159 | ABG79_02236 | Hypothetical protein. | ComE operon protein 1. | 0.463 |
KRQ86969.1 | epsF_1 | ABG79_01159 | ABG79_00245 | Hypothetical protein. | Type II secretion system protein F. | 0.483 |
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