Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRQ86803.1 | KRQ86806.1 | ABG79_01294 | ABG79_01297 | Hypothetical protein. | Peptidase family M50. | 0.659 |
KRQ86803.1 | dacB | ABG79_01294 | ABG79_01292 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | 0.735 |
KRQ86803.1 | dacF_1 | ABG79_01294 | ABG79_01299 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase DacF precursor; Belongs to the peptidase S11 family. | 0.505 |
KRQ86803.1 | pcnB | ABG79_01294 | ABG79_01298 | Hypothetical protein. | Poly(A) polymerase I precursor; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.647 |
KRQ86803.1 | scpA | ABG79_01294 | ABG79_01296 | Hypothetical protein. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.659 |
KRQ86803.1 | scpB | ABG79_01294 | ABG79_01295 | Hypothetical protein. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.659 |
KRQ86803.1 | ytfJ | ABG79_01294 | ABG79_01293 | Hypothetical protein. | Putative spore protein YtfJ. | 0.904 |
KRQ86806.1 | KRQ86803.1 | ABG79_01297 | ABG79_01294 | Peptidase family M50. | Hypothetical protein. | 0.659 |
KRQ86806.1 | dacB | ABG79_01297 | ABG79_01292 | Peptidase family M50. | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | 0.641 |
KRQ86806.1 | dacF_1 | ABG79_01297 | ABG79_01299 | Peptidase family M50. | D-alanyl-D-alanine carboxypeptidase DacF precursor; Belongs to the peptidase S11 family. | 0.690 |
KRQ86806.1 | ispH | ABG79_01297 | ABG79_01605 | Peptidase family M50. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.498 |
KRQ86806.1 | pcnB | ABG79_01297 | ABG79_01298 | Peptidase family M50. | Poly(A) polymerase I precursor; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.789 |
KRQ86806.1 | pdp | ABG79_01297 | ABG79_01300 | Peptidase family M50. | Pyrimidine-nucleoside phosphorylase. | 0.539 |
KRQ86806.1 | scpA | ABG79_01297 | ABG79_01296 | Peptidase family M50. | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.873 |
KRQ86806.1 | scpB | ABG79_01297 | ABG79_01295 | Peptidase family M50. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.873 |
KRQ86806.1 | trmB | ABG79_01297 | ABG79_01993 | Peptidase family M50. | tRNA (guanine-N(7)-)-methyltransferase. | 0.479 |
KRQ86806.1 | ytfJ | ABG79_01297 | ABG79_01293 | Peptidase family M50. | Putative spore protein YtfJ. | 0.792 |
dacB | KRQ86803.1 | ABG79_01292 | ABG79_01294 | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | Hypothetical protein. | 0.735 |
dacB | KRQ86806.1 | ABG79_01292 | ABG79_01297 | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | Peptidase family M50. | 0.641 |
dacB | dacF_1 | ABG79_01292 | ABG79_01299 | D-alanyl-D-alanine carboxypeptidase DacB precursor; Belongs to the peptidase S11 family. | D-alanyl-D-alanine carboxypeptidase DacF precursor; Belongs to the peptidase S11 family. | 0.815 |
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