STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIAHStage III sporulation protein AH. (161 aa)    
Predicted Functional Partners:
KRQ86837.1
Hypothetical protein.
 
  
 0.997
KRQ86843.1
Hypothetical protein.
 
  
 0.976
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.937
KRQ86838.1
Stage III sporulation protein AF (Spore_III_AF).
  
  
 0.936
KRQ86841.1
Stage III sporulation protein AC/AD protein family protein.
 
  
 0.927
KRQ86842.1
Stage III sporulation protein SpoAB.
 
  
 0.914
KRQ86840.1
Stage III sporulation protein AC/AD protein family protein.
 
  
 0.897
KRQ86788.1
Stage II sporulation protein P (SpoIIP).
  
   
 0.819
KRQ86578.1
Sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.
  
  
 0.810
spoIVA
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.805
Your Current Organism:
Caloramator mitchellensis
NCBI taxonomy Id: 908809
Other names: C. mitchellensis, Caloramator mitchellensis Ogg and Patel 2011, Caloramator sp. VF08, JCM 15828, KCTC 5735, strain VF08
Server load: low (28%) [HD]