STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRQ86053.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
KRQ86052.1
Hypothetical protein.
       0.828
KRQ86050.1
Hypothetical protein.
       0.827
KRQ86054.1
Phage major tail protein 2.
       0.812
KRQ86051.1
Hypothetical protein.
       0.802
KRQ86055.1
Hypothetical protein.
       0.753
KRQ86056.1
Hypothetical protein.
       0.752
KRQ86057.1
Hypothetical protein.
       0.718
KRQ86049.1
Hypothetical protein.
       0.516
KRQ86048.1
Phage minor structural protein GP20.
       0.468
Your Current Organism:
Caloramator mitchellensis
NCBI taxonomy Id: 908809
Other names: C. mitchellensis, Caloramator mitchellensis Ogg and Patel 2011, Caloramator sp. VF08, JCM 15828, KCTC 5735, strain VF08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.