close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX27Sorting nexin 27. (466 aa)    
Predicted Functional Partners:
VPS26A
VPS26, retromer complex component A.
   
 0.994
VPS26B
VPS26, retromer complex component B.
   
 0.979
VPS35
VPS35 retromer complex component.
    
 0.978
VPS29
VPS29 retromer complex component.
    
 0.974
SNX1
Sorting nexin 1.
    
 0.966
SNX2
Sorting nexin 2.
    
 0.959
WASHC5
WASH complex subunit 5.
    
 0.943
ENSCPIP00010010410
annotation not available
    
 0.942
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
 0.941
WASHC1
WASH complex subunit 1.
    
 0.939
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.