close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF5APHD finger protein 5A. (110 aa)    
Predicted Functional Partners:
SF3B1
Splicing factor 3b subunit 1.
   
 0.999
SF3B5
Splicing factor 3b subunit 5.
   
 0.999
SF3A2
Splicing factor 3a subunit 2.
    
 0.998
ENSCPIP00010004449
annotation not available
   
 0.998
SF3B6
Splicing factor 3b subunit 6.
   
 0.998
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.998
SF3B4
Splicing factor 3b subunit 4.
    
 0.998
RBMX2
RNA binding motif protein X-linked 2.
    
 0.998
BUD31
BUD31 homolog.
   
 0.998
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.997
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.