Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUP50Nucleoporin 50. (468 aa)    
Predicted Functional Partners:
NUP153
Nucleoporin 153.
   
 0.999
NUP43
Nucleoporin 43.
   
 0.996
NUP85
Nucleoporin 85.
   
 0.994
NUP98
Nucleoporin 98.
   
 0.990
NUP88
Nucleoporin 88.
   
 
 0.987
NUP35
Nucleoporin 35.
   
 0.986
NUP214
Nucleoporin 214.
   
 0.985
NUP107
Nucleoporin 107.
   
 0.985
AAAS
Aladin WD repeat nucleoporin.
   
 
 0.985
NDC1
NDC1 transmembrane nucleoporin.
   
 
 0.985
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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