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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCO6Transmembrane and coiled-coil domains 6. (445 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.818
CSE1L
Chromosome segregation 1 like.
   
 0.789
NUP153
Nucleoporin 153.
    
 0.661
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.634
ENSCPIP00010004489
annotation not available
    
 
 0.607
EXOSC10
Exosome component 10.
    
   0.598
ENSCPIP00010016483
annotation not available
    
   0.598
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 
 0.593
RANBP2
RAN binding protein 2.
   
 0.587
YARS1
tyrosyl-tRNA synthetase 1.
   
  
 0.564
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.