Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FREM1FRAS1 related extracellular matrix 1. (2183 aa)    
Predicted Functional Partners:
FREM2
FRAS1 related extracellular matrix 2.
   
 0.930
ENSCPIP00010018178
annotation not available
    
 0.930
ITGB1
Integrin subunit beta 1.
    
 0.929
ITGA8
Integrin subunit alpha 8.
   
 
 0.915
NPNT
Nephronectin.
    
 0.913
ITGB2
Integrin subunit beta 2.
    
 0.838
ITGAV
Integrin subunit alpha V.
   
 
 0.838
ITGB8
Integrin subunit beta 8.
    
 0.747
FURIN
Furin, paired basic amino acid cleaving enzyme.
    
 0.732
ENSCPIP00010018555
annotation not available
   
 
 0.723
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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