Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPS6KC1Ribosomal protein S6 kinase C1. (1047 aa)    
Predicted Functional Partners:
ADAP1
ArfGAP with dual PH domains 1.
      
 0.789
USE1
Unconventional SNARE in the ER 1.
    
 0.777
STX18
Syntaxin 18.
    
 0.755
RINT1
RAD50 interactor 1.
   
 0.750
LYPD6B
LY6/PLAUR domain containing 6B.
     
 0.743
TATDN3
TatD DNase domain containing 3.
      
 0.740
ZW10
Zw10 kinetochore protein.
    
 0.738
YKT6
YKT6 v-SNARE homolog.
    
 0.721
SNX3
Sorting nexin 3.
     
 0.714
SNX12
Sorting nexin 12.
     
 0.714
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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