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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT44tRNA methyltransferase 44 homolog. (569 aa)    
Predicted Functional Partners:
TRMT6
tRNA methyltransferase 6.
   
  
 0.585
TRMT61A
tRNA methyltransferase 61A.
   
  
 0.559
TRUB1
TruB pseudouridine synthase family member 1.
   
  
 0.527
WDR4
WD repeat domain 4.
   
  
 0.494
TARBP1
TAR (HIV-1) RNA binding protein 1.
   
  
 0.494
EEF1AKNMT
eEF1A lysine and N-terminal methyltransferase.
   
  
 0.465
PUS3
Pseudouridine synthase 3.
   
  
 0.460
METTL5
Methyltransferase like 5.
      
 0.451
ENSCPIP00010000977
annotation not available
   
  
 0.447
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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