Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KATNA1Katanin catalytic subunit A1. (488 aa)    
Predicted Functional Partners:
KATNB1
Katanin regulatory subunit B1.
   
 
 0.996
KATNBL1
Katanin regulatory subunit B1 like 1.
   
 
 0.990
ASPM
Abnormal spindle microtubule assembly.
    
 
 0.875
SLITRK1
SLIT and NTRK like family member 1.
      
 0.805
GPD2
Glycerol-3-phosphate dehydrogenase 2.
  
 0.798
CUL3
Cullin 3.
    
 0.789
PGBD5
piggyBac transposable element derived 5.
    
 0.738
PSMD14
Proteasome 26S subunit, non-ATPase 14.
   
 0.710
USP47
Ubiquitin specific peptidase 47.
    
 
 0.703
UBASH3A
Ubiquitin associated and SH3 domain containing A.
     
 0.700
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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