Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFR3BEFR3 homolog B. (816 aa)    
Predicted Functional Partners:
PI4KA
Phosphatidylinositol 4-kinase alpha.
   
 
 0.942
TTC7A
Tetratricopeptide repeat domain 7A.
   
 
 0.858
TTC7B
Tetratricopeptide repeat domain 7B.
   
 
 0.858
ENSCPIP00010017549
annotation not available
      
 0.651
FAM126A
Family with sequence similarity 126 member A.
      
 0.579
GOLPH3
Golgi phosphoprotein 3.
      
 0.515
PITPNB
Phosphatidylinositol transfer protein beta.
      
 0.463
PITPNA
Phosphatidylinositol transfer protein alpha.
      
 0.463
COG5
Component of oligomeric golgi complex 5.
   
  
 0.450
PI4KB
Phosphatidylinositol 4-kinase beta.
      
 0.447
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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