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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB39BRAB39B, member RAS oncogene family. (213 aa)    
Predicted Functional Partners:
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.946
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.945
WDR41
WD repeat domain 41.
     
 0.938
SQSTM1
Sequestosome 1.
    
 0.933
RAB8A
RAB8A, member RAS oncogene family.
  
 
 
0.920
GDI2
GDP dissociation inhibitor 2.
   
 0.757
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
     
 0.696
ENSCPIP00010002015
annotation not available
  
  
 
0.678
GSAP
Gamma-secretase activating protein.
    
 0.670
ENSCPIP00010009127
annotation not available
    
 0.645
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.