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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF395Zinc finger protein 395. (465 aa)    
Predicted Functional Partners:
BARD1
BRCA1 associated RING domain 1.
    
 0.929
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 0.922
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
 0.862
ITSN2
Intersectin 2.
     
 0.831
RPL21
Ribosomal protein L21.
   
   0.815
RAG2
Recombination activating 2.
   
 0.807
ENSCPIP00010002173
annotation not available
    
 0.746
GTSE1
G2 and S-phase expressed 1.
    
 0.746
RPL8
Ribosomal protein L8.
   
 
 0.743
ABRAXAS1
Abraxas 1, BRCA1 A complex subunit.
    
 0.727
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.