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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMMECR1AMMECR nuclear protein 1. (119 aa)    
Predicted Functional Partners:
EDC3
Enhancer of mRNA decapping 3.
   
  
 0.574
PRPF38A
pre-mRNA processing factor 38A.
      
 0.565
ZC3H14
Zinc finger CCCH-type containing 14.
    
 
 0.563
FCF1
FCF1 rRNA-processing protein.
      
 0.532
MYO9B
Myosin IXB.
      
 0.531
SLC4A1AP
Solute carrier family 4 member 1 adaptor protein.
      
 0.531
MEMO1
Mediator of cell motility 1.
  
    0.483
ZNF384
Zinc finger protein 384.
   
  
 0.463
RBM45
RNA binding motif protein 45.
   
  
 0.462
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
     
 0.460
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.