Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMOC2SPARC related modular calcium binding 2. (447 aa)    
Predicted Functional Partners:
SLC38A4
Solute carrier family 38 member 4.
      
 0.586
SLC26A5
Solute carrier family 26 member 5.
      
 0.583
ICK
Intestinal cell kinase.
      
 0.582
CDK14
Cyclin dependent kinase 14.
      
 0.582
LOXHD1
Lipoxygenase homology domains 1.
      
 0.578
MSANTD1
Myb/SANT DNA binding domain containing 1.
      
 0.574
TDRP
Testis development related protein.
      
 0.568
MIPOL1
Mirror-image polydactyly 1.
      
 0.563
KLHL18
Kelch like family member 18.
      
 0.557
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
      
 0.552
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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