STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRNAU1APtRNA selenocysteine 1 associated protein 1. (287 aa)    
Predicted Functional Partners:
PRPF39
pre-mRNA processing factor 39.
   
 0.994
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 0.988
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.985
ENSCPIP00010004449
annotation not available
   
 0.985
SF3B1
Splicing factor 3b subunit 1.
   
 0.983
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.983
SF3B4
Splicing factor 3b subunit 4.
    
0.982
SF3A2
Splicing factor 3a subunit 2.
    
 0.981
SF3A1
Splicing factor 3a subunit 1.
    
 0.980
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
    
 0.976
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.