Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TDO2Tryptophan 2,3-dioxygenase. (406 aa)    
Predicted Functional Partners:
ASMTL
Acetylserotonin O-methyltransferase like.
    
 
 0.961
TPH1
Tryptophan hydroxylase 1.
  
 
 0.953
TPH2
Tryptophan hydroxylase 2.
  
 
 0.941
HDC
Histidine decarboxylase.
    
 0.917
ENSCPIP00010010371
annotation not available
     
  0.905
DPM1
Dolichyl-phosphate mannosyltransferase subunit 1, catalytic.
    
   0.883
TAT
Tyrosine aminotransferase.
  
 
 0.850
PAH
Phenylalanine hydroxylase.
  
 
 0.813
KYAT3
Kynurenine aminotransferase 3.
  
 
 0.805
ENSCPIP00010017605
annotation not available
  
 
 0.805
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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