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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM1ALysine demethylase 1A. (702 aa)    
Predicted Functional Partners:
RCOR1
REST corepressor 1.
    
 0.999
HMG20B
High mobility group 20B.
   
 0.991
PHF21A
PHD finger protein 21A.
    
 0.986
RCOR3
REST corepressor 3.
    
 0.963
TP53BP1
Tumor protein p53 binding protein 1.
   
 0.935
MSH3
mutS homolog 3.
  
 0.921
MSH6
mutS homolog 6.
  
  0.921
MSH2
mutS homolog 2.
  
  0.917
ATM
ATM serine/threonine kinase.
     
 0.911
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
   
 
  0.910
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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