Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GOLGA4Golgin A4. (2252 aa)    
Predicted Functional Partners:
ARL1
ADP ribosylation factor like GTPase 1.
    
 0.968
TRIP11
Thyroid hormone receptor interactor 11.
   
 0.859
GCC1
GRIP and coiled-coil domain containing 1.
   
 
 0.843
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.788
NOL11
Nucleolar protein 11.
   
   0.701
CDK5RAP2
CDK5 regulatory subunit associated protein 2.
    
 
 0.700
UTP4
UTP4 small subunit processome component.
    
   0.650
MZT1
Mitotic spindle organizing protein 1.
    
 
 0.627
NBR1
NBR1 autophagy cargo receptor.
    
 0.627
GRIP1
Glutamate receptor interacting protein 1.
    
 0.610
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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