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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDE1Glycerophosphodiester phosphodiesterase 1. (255 aa)    
Predicted Functional Partners:
GPD2
Glycerol-3-phosphate dehydrogenase 2.
  
 0.770
CRLS1
Cardiolipin synthase 1.
   
 0.770
PLA2G4A
Phospholipase A2 group IVA.
   
 
 0.737
L2HGDH
L-2-hydroxyglutarate dehydrogenase.
    
 0.695
MBOAT2
Membrane bound O-acyltransferase domain containing 2.
   
 
 0.684
MGLL
Monoglyceride lipase.
    
 0.623
PHACTR2
Phosphatase and actin regulator 2.
      
 0.595
SNX29
Sorting nexin 29.
      
 0.593
EPHX2
Epoxide hydrolase 2.
    
 0.574
GABPA
GA binding protein transcription factor subunit alpha.
      
 0.556
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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