Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOD1Superoxide dismutase 1. (154 aa)    
Predicted Functional Partners:
ENSCPIP00010011482
annotation not available
  
 0.996
PARK7
Parkinsonism associated deglycase.
  
 0.984
CAT
Catalase.
  
 0.978
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 0.953
BCL2
BCL2 apoptosis regulator.
    
 0.944
NEFL
Neurofilament light.
     
 0.943
VDAC1
Voltage dependent anion channel 1.
   
 0.936
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
  0.934
PSMB4
Proteasome 20S subunit beta 4.
   
 
  0.927
PSMB1
Proteasome 20S subunit beta 1.
   
 
 0.927
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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