STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMJD6Jumonji domain containing 6, arginine demethylase and lysine hydroxylase. (303 aa)    
Predicted Functional Partners:
BRD3
Bromodomain containing 3.
    
 
 0.610
ENSCPIP00010005342
annotation not available
    
 
 0.595
BRD2
Bromodomain containing 2.
    
 
 0.595
ENSCPIP00010011513
annotation not available
    
 0.589
ENSCPIP00010011531
annotation not available
    
 0.589
ENSCPIP00010011535
annotation not available
    
 0.589
ENSCPIP00010011538
annotation not available
    
 0.589
LIN9
Lin-9 DREAM MuvB core complex component.
      
 0.584
FAT1
FAT atypical cadherin 1.
      
 0.551
METTL23
Methyltransferase like 23.
      
 0.545
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.